Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | BIOCARTA_NF-KB SIGNALING PATHWAY |
| Enrichment Score (ES) | -0.7159888 |
| Normalized Enrichment Score (NES) | -1.6735984 |
| Nominal p-value | 0.005988024 |
| FDR q-value | 0.21881245 |
| FWER p-Value | 0.874 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | MAP3K7IP1 | 1426898_at 1447692_x_at | 2306 | 0.650 | -0.0629 | No | ||
| 2 | MAP3K7 | 1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at | 2595 | 0.574 | -0.0387 | No | ||
| 3 | RIPK1 | 1419508_at 1439273_at 1449485_at | 3565 | 0.402 | -0.0567 | No | ||
| 4 | IRAK1 | 1448668_a_at 1460649_at | 8138 | 0.160 | -0.2549 | No | ||
| 5 | TNF | 1419607_at | 11889 | 0.060 | -0.4221 | No | ||
| 6 | MYD88 | 1419272_at | 13038 | 0.032 | -0.4724 | No | ||
| 7 | IL1A | 1421473_at | 14597 | -0.018 | -0.5423 | No | ||
| 8 | TRAF6 | 1421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at | 14986 | -0.032 | -0.5579 | No | ||
| 9 | IL1R1 | 1448950_at 1459777_at | 15855 | -0.073 | -0.5928 | No | ||
| 10 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 16169 | -0.091 | -0.6012 | No | ||
| 11 | CHUK | 1417091_at 1428210_s_at 1451383_a_at | 17435 | -0.202 | -0.6457 | No | ||
| 12 | FADD | 1416888_at 1446499_at | 18328 | -0.330 | -0.6650 | No | ||
| 13 | IKBKB | 1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at | 19447 | -0.577 | -0.6784 | Yes | ||
| 14 | RELA | 1419536_a_at | 20015 | -0.767 | -0.6543 | Yes | ||
| 15 | TLR4 | 1418162_at 1418163_at 1430695_at 1442827_at | 20231 | -0.858 | -0.6082 | Yes | ||
| 16 | IKBKG | 1421208_at 1421209_s_at 1435646_at 1435647_at 1450161_at 1454690_at | 20443 | -0.967 | -0.5549 | Yes | ||
| 17 | MAP3K1 | 1424850_at | 21128 | -1.590 | -0.4825 | Yes | ||
| 18 | TNFRSF1A | 1417291_at | 21181 | -1.673 | -0.3760 | Yes | ||
| 19 | NFKB1 | 1427705_a_at 1442949_at | 21207 | -1.718 | -0.2652 | Yes | ||
| 20 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 21477 | -2.135 | -0.1385 | Yes | ||
| 21 | MAP4K4 | 1422615_at 1440609_at 1448050_s_at 1459912_at | 21597 | -2.448 | 0.0155 | Yes |
